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Remove GET_FIELD_AS macro, replace with template methods

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This commit is contained in:
Tim Wojtulewicz 2020-12-04 16:35:08 -07:00
parent a94fcad957
commit 4962986df1
15 changed files with 61 additions and 53 deletions
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8
src/SmithWaterman.cc
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@ -109,19 +109,19 @@ Substring::Vec* Substring::VecFromPolicy(VectorVal* vec)
if ( ! v )
continue;
const String* str = v->AsRecordVal()->GetStringField(0);
const String* str = v->AsRecordVal()->GetFieldAs<StringVal>(0);
auto* substr = new Substring(*str);
const VectorVal* aligns = v->AsRecordVal()->GetField(1)->AsVectorVal();
for ( unsigned int j = 1; j <= aligns->Size(); ++j )
{
const RecordVal* align = aligns->AsVectorVal()->At(j)->AsRecordVal();
const String* str = align->GetStringField(0);
int index = align->GetCountField(1);
const String* str = align->GetFieldAs<StringVal>(0);
int index = align->GetFieldAs<CountVal>(1);
substr->AddAlignment(str, index);
}
bool new_alignment = v->AsRecordVal()->GetBoolField(2);
bool new_alignment = v->AsRecordVal()->GetFieldAs<BoolVal>(2);
substr->MarkNewAlignment(new_alignment);
result->push_back(substr);