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Remove BroValUnion by hoisting underlying Val subclass values into subclasses

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Vern Paxson 2020-11-10 15:18:54 -08:00 • committed by Tim Wojtulewicz
parent 49ca8e2163
commit 7f92a573d2
29 changed files with 632 additions and 512 deletions
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8
src/SmithWaterman.cc
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@ -109,19 +109,19 @@ Substring::Vec* Substring::VecFromPolicy(VectorVal* vec)
if ( ! v )
continue;
const String* str = v->AsRecordVal()->GetField(0)->AsString();
const String* str = v->AsRecordVal()->GetStringField(0);
auto* substr = new Substring(*str);
const VectorVal* aligns = v->AsRecordVal()->GetField(1)->AsVectorVal();
for ( unsigned int j = 1; j <= aligns->Size(); ++j )
{
const RecordVal* align = aligns->AsVectorVal()->At(j)->AsRecordVal();
const String* str = align->GetField(0)->AsString();
int index = align->GetField(1)->AsCount();
const String* str = align->GetStringField(0);
int index = align->GetCountField(1);
substr->AddAlignment(str, index);
}
bool new_alignment = v->AsRecordVal()->GetField(2)->AsBool();
bool new_alignment = v->AsRecordVal()->GetBoolField(2);
substr->MarkNewAlignment(new_alignment);
result->push_back(substr);